Benefits Analyst salary at San Francisco

The average benefits analyst salary at San Francisco was $83,738 , which is 25 percent lower than the average salary for this job in California, but 39 percent higher than the national average for this job . Benefits Analyst salaries at San Francisco typically range from $33,506 to $134,244 (25th to 75th percentile). The highest reported benefits analyst salary was $135,649. There are 13 employees at San Francisco with the job title benefits analyst.