The average vice chancellor salary at CUNY was $271,004 , which is 9 percent higher than the average salary for this job in New York, and 29 percent higher than the national average for this job . Vice Chancellor salaries at CUNY typically range from $246,865 to $294,939 (25th to 75th percentile). The highest reported vice chancellor salary was $298,925. There are 7 employees at CUNY with the job title vice chancellor.